PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023533211.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 348aa MW: 40090.8 Da PI: 7.1414

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023533211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	51	104	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ XP_023533211.1 51 PRLRWTPDLHLAFVNAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 104 8****************************************************7 PP
2	Myb_DNA-binding	49.7	8.6e-16	52	103	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ g++ ++ks++q+y+ XP_023533211.1 52 RLRWTPDLHLAFVNAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 103 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MMINGFDLNE EATAIDEENS SSNNGSLEEE KEEEDQRRSG GVRKYSRSKM PRLRWTPDLH 60 LAFVNAVERL GGQERATPKL VLQLMNVRGL SIAHVKSHLQ MYRSKKLDES GQVLSQTMFG 120 RNHIVQMYQR LNHHHHHHGH FRPHLLTPNP SRFGEWEAMD PLAMRPSANP WRTDNSKMEK 180 LCNERPPPFQ MGTNLMTSHI YEVANAISRT TPIRPSRFLE DKKWPPHELI SPHHFRINNN 240 NNNVTTQKDH FRPSNKLGSF DHDLLHPPTP SSHVPMEPNR PSTDLRLSLR NSFEDGVGMA 300 MNDEDKKEEE INTVLSLSLS SSSPRQHEDE DCKQTSWAEY LGSDHAKL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MMINGFDLNE EATAIDEENS SSNNGSLEEE KEEEDQRRSG GVRKYSRSKM PRLRWTPDLH  60
LAFVNAVERL GGQERATPKL VLQLMNVRGL SIAHVKSHLQ MYRSKKLDES GQVLSQTMFG  120
RNHIVQMYQR LNHHHHHHGH FRPHLLTPNP SRFGEWEAMD PLAMRPSANP WRTDNSKMEK  180
LCNERPPPFQ MGTNLMTSHI YEVANAISRT TPIRPSRFLE DKKWPPHELI SPHHFRINNN  240
NNNVTTQKDH FRPSNKLGSF DHDLLHPPTP SSHVPMEPNR PSTDLRLSLR NSFEDGVGMA  300
MNDEDKKEEE INTVLSLSLS SSSPRQHEDE DCKQTSWAEY LGSDHAKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	7e-36	G2-like family protein