PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533199.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SAP
Protein Properties Length: 442aa    MW: 49300.9 Da    PI: 6.7403
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP673.53e-205444215454
             SAP  15 gseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrtkllrd 109
                     +s+gg+   +  g++++psssr+raan+vwpePf+ealatqva+dasrslGr+ aa al nvfqvcs wravsrs+llw+rlt +iW r+ +l d
  XP_023533199.1   4 SSSGGARRRRPRGDFDTPSSSRRRAANGVWPEPFIEALATQVAVDASRSLGRIHAAAALSNVFQVCSMWRAVSRSELLWHRLTTQIWGRSFRLLD 98 
                     34445555566699********************************************************************************* PP

             SAP 110 tWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGi 204
                     tWr+ey+y+h ta nf +rry ++ lqfd++dvde   +  l+Crclals +yla+GfadG+vrlfdl+trlhv tf+p+hrdrlG fsravsGi
  XP_023533199.1  99 TWRDEYVYWHTTACNFWRRRYLHTILQFDQSDVDE---PAGLMCRCLALSLHYLACGFADGTVRLFDLTTRLHVATFHPHHRDRLGLFSRAVSGI 190
                     *******************************9999...578****************************************************** PP

             SAP 205 visdsrlvfatldGdihvavidg..agaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhm 297
                     vi+d+ lvfa++dGd+hv +i +  +g++++rr+  G+v+ndG+lvdfaG++rWwvGlyaGvpGr+fh+Wd++teelvfvGGsltdPeav+GWhm
  XP_023533199.1 191 VITDACLVFASVDGDVHVGIIAAamNGVSPTRRVCEGNVMNDGVLVDFAGCDRWWVGLYAGVPGRTFHVWDGNTEELVFVGGSLTDPEAVTGWHM 285
                     ********************986224699****************************************************************** PP

             SAP 298 lteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlg 391
                     lte te vGrvrv+++e+avaCt+l+l+v+dlr+q+vvl+eee+ +  iv+s+d+sne y+vvd +Gv++vrrv+++eevcrf v+g  qrg +g
  XP_023533199.1 286 LTEPTEPVGRVRVSNQESAVACTRLQLMVLDLRDQEVVLNEEENGEVRIVTSMDVSNERYIVVDGEGVGIVRRVDTMEEVCRFLVSGaGQRGAMG 380
                     ***************************************************************************************99****** PP

             SAP 392 CvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                     C+n gya++ ++g ++vWeie+ + +ly +rervg + a+va+dr+va+s  d  +hl+dfga
  XP_023533199.1 381 CINMGYAVMNSSGAMKVWEIEHGQ-FLYRFRERVGAATAMVANDRYVAASGFDRRLHLWDFGA 442
                     *********************966.************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MSSSSSGGAR RRRPRGDFDT PSSSRRRAAN GVWPEPFIEA LATQVAVDAS RSLGRIHAAA  60
ALSNVFQVCS MWRAVSRSEL LWHRLTTQIW GRSFRLLDTW RDEYVYWHTT ACNFWRRRYL  120
HTILQFDQSD VDEPAGLMCR CLALSLHYLA CGFADGTVRL FDLTTRLHVA TFHPHHRDRL  180
GLFSRAVSGI VITDACLVFA SVDGDVHVGI IAAAMNGVSP TRRVCEGNVM NDGVLVDFAG  240
CDRWWVGLYA GVPGRTFHVW DGNTEELVFV GGSLTDPEAV TGWHMLTEPT EPVGRVRVSN  300
QESAVACTRL QLMVLDLRDQ EVVLNEEENG EVRIVTSMDV SNERYIVVDG EGVGIVRRVD  360
TMEEVCRFLV SGAGQRGAMG CINMGYAVMN SSGAMKVWEI EHGQFLYRFR ERVGAATAMV  420
ANDRYVAASG FDRRLHLWDF GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-165SAP family protein