PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533021.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 178aa    MW: 20564 Da    PI: 9.8438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1795145255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdps   k  r++lg+f +  +Aa+a++ a+ k++g
  XP_023533021.1  95 KYRGVRRRP-WGKFAAEIRDPSR--KGSRVWLGTFNSDVDAARAYDSAAFKMRG 145
                     8********.**********854..34**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MELREEDDFS RLKFIQRHRL QDSDSFRTLL DFEFPLPSAF FSLPSIKFEF EDFEFMKKPS  60
EEEEPPIQKP EQSERSSSPE VAMAEEVSSS DGGRKYRGVR RRPWGKFAAE IRDPSRKGSR  120
VWLGTFNSDV DAARAYDSAA FKMRGRKAKL NFPLDAGKSE PPPPPGNGRN RRRETKVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-38ERF family protein