PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533017.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 179aa    MW: 19936.2 Da    PI: 9.9949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-2193143255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+++g  +r++lg+++ta eAaka+++a+ k++g
  XP_023533017.1  93 HYRGVRRRP-WGKFAAEIRDPNKRG--ARVWLGTYDTAIEAAKAYDRAAFKMRG 143
                     69*******.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MASGDDVSTL DFIRQHLLSD FNSIEAFASN LDFINNNGLT PQIPVAPSKI GHRRPSLNVM  60
IPPKTHSVQS PAAATATVTT SSDVKSDVGL SQHYRGVRRR PWGKFAAEIR DPNKRGARVW  120
LGTYDTAIEA AKAYDRAAFK MRGSKAILNF PLEAGKEAEE PPSXHFKDYV RRLYLDDRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-45ERF family protein