PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532818.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 301aa MW: 33702.1 Da PI: 6.6304

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	8.9e-08	250	283	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_023532818.1 250 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 283 469*****************************87 PP
2	ELK	25.5	3.2e-09	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_023532818.1 204 ELKIELKQGFKSRIEDVREEIL 225 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MQEPGLGMMT AAAAAAAAST AALSADVSIS GDNAQLKAEI ATHPLYEQLL AAHVACLRVA 60 TPIDQLPIID AQLAQSHHVL RSYASQQHHQ HAHSLSPHER QELDNFLAQY MIVLCSFKDQ 120 LQQHVRVHAV EAVMACREIE NTLQALTGVS LGEGSGATMS DDDDDVPMEF SLDQSGGDAH 180 DMMGFGPLLP TESERSLMER VRQELKIELK QGFKSRIEDV REEILRKRRA GKLPGDTTTV 240 LKNWWQQHSK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHSNSQ SVTSLKSKRK 300 R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	301	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-168	TALE family protein