PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532763.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 312aa    MW: 35606.1 Da    PI: 7.3435
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0014189210223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C+k+F++   L +H + +
  XP_023532763.1 189 KCQKCTKHFRSYRALFSHEKIC 210
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MPSKDKSKKR SFDLIHMDSH KCKLCSRLFT NGRALGGHMK AHLTAAPALP LPPSKPPTIH  60
VALPFSTSSS SAAADDDSLE SEHNPTLYEV RENPNRDFRF SDPVFDIVLQ DRESETESKN  120
PTCNRSKRRR QPPLELPEPA SSVSYTSPEE DLAMCLMMLS RDRRIQNQNQ IPNQFEKIRA  180
KKPLRRKKKC QKCTKHFRSY RALFSHEKIC QLKTELEEEE EEEEEEEEEE EEEHEHFKNG  240
GNRRRIFKCP FCFKLFGSGQ ALGGHKRSHF VSSTNGGVSV NSSVSLKVEI SLIDLNLPAP  300
LEEDHYSVVS NA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177188KIRAKKPLRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-26C2H2 family protein