PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532751.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 460aa MW: 51006.4 Da PI: 4.8674

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.6	6.9e-34	239	293	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLH++Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_023532751.1 239 KPRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRT 293 79****************************************************8 PP
2	Myb_DNA-binding	55.7	1.1e-17	241	292	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023532751.1 241 RMRWTPELHDAFVEAVNKLGGSeraTPKGVLKLMQvEGLTIYHVKSHLQKYR 292 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MKFVPSFDLR MKIEASLVSS IASSSARQHS SAEVSMEREL VSRPLVHSNH LHSSSGVVGN 60 IFSSSPGFST DLHYSSVSFY ENQSVAPFIS DTSANGALLH SHSELFSSTN HPTGENVNSW 120 CTDALPDFLE APENNPVGNS HVENNSCSSL MVSDEFSKEN DWQDWTDRLI TDDSLTSNWS 180 DLLVDANVAD LEPKIAYQAS KPVIKMQVQQ SQIQNQLPSS GEISMIATST PSSNGAPSKP 240 RMRWTPELHD AFVEAVNKLG GSERATPKGV LKLMQVEGLT IYHVKSHLQK YRTARYQPES 300 SKGSMEKSTT SLEDISSLDL KTSIDITEAL RLQMEVQKKL HEQLEIQRNL QLRIEEQGKY 360 LQMMFEKQCK SGNNLKASTL DESPFSDTVD DFSAKTELET SQVEICTART DPSEADTISE 420 NVTNEEGGKP EAQHRKVPEN TEPDVSKSSS QLSKRQRTEN

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MKFVPSFDLR MKIEASLVSS IASSSARQHS SAEVSMEREL VSRPLVHSNH LHSSSGVVGN  60
IFSSSPGFST DLHYSSVSFY ENQSVAPFIS DTSANGALLH SHSELFSSTN HPTGENVNSW  120
CTDALPDFLE APENNPVGNS HVENNSCSSL MVSDEFSKEN DWQDWTDRLI TDDSLTSNWS  180
DLLVDANVAD LEPKIAYQAS KPVIKMQVQQ SQIQNQLPSS GEISMIATST PSSNGAPSKP  240
RMRWTPELHD AFVEAVNKLG GSERATPKGV LKLMQVEGLT IYHVKSHLQK YRTARYQPES  300
SKGSMEKSTT SLEDISSLDL KTSIDITEAL RLQMEVQKKL HEQLEIQRNL QLRIEEQGKY  360
LQMMFEKQCK SGNNLKASTL DESPFSDTVD DFSAKTELET SQVEICTART DPSEADTISE  420
NVTNEEGGKP EAQHRKVPEN TEPDVSKSSS QLSKRQRTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-103	G2-like family protein