PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532748.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 489aa MW: 54327.3 Da PI: 4.848

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.5e-34	268	322	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLH++Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_023532748.1 268 KPRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRT 322 79****************************************************8 PP
2	Myb_DNA-binding	55.6	1.2e-17	270	321	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_023532748.1 270 RMRWTPELHDAFVEAVNKLGGSeraTPKGVLKLMQvEGLTIYHVKSHLQKYR 321 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MKFVPSFDLR MKIEASLVSS IASSSARQHS SAEVKEDISK PLRVLLPTCL EEVYPKLPDS 60 QQVSMERELV SRPLVHSNHL HSSSGVVGNI FSSSPGFSTD LHYSSVSFYE NQSVAPFISD 120 TSANGALLHS HSELFSSTNH PTGENVNSWC TDALPDFLEA PENNPVGNSH VENNSCSSLM 180 VSDEFSKEND WQDWTDRLIT DDSLTSNWSD LLVDANVADL EPKIAYQASK PVIKMQVQQS 240 QIQNQLPSSG EISMIATSTP SSNGAPSKPR MRWTPELHDA FVEAVNKLGG SERATPKGVL 300 KLMQVEGLTI YHVKSHLQKY RTARYQPESS KGSMEKSTTS LEDISSLDLK TSIDITEALR 360 LQMEVQKKLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKS GNNLKASTLD ESPFSDTVDD 420 FSAKTELETS QVEICTARTD PSEADTISEN VTNEEGGKPE AQHRKVPENT EPDVSKSSSQ 480 LSKRQRTEN

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MKFVPSFDLR MKIEASLVSS IASSSARQHS SAEVKEDISK PLRVLLPTCL EEVYPKLPDS  60
QQVSMERELV SRPLVHSNHL HSSSGVVGNI FSSSPGFSTD LHYSSVSFYE NQSVAPFISD  120
TSANGALLHS HSELFSSTNH PTGENVNSWC TDALPDFLEA PENNPVGNSH VENNSCSSLM  180
VSDEFSKEND WQDWTDRLIT DDSLTSNWSD LLVDANVADL EPKIAYQASK PVIKMQVQQS  240
QIQNQLPSSG EISMIATSTP SSNGAPSKPR MRWTPELHDA FVEAVNKLGG SERATPKGVL  300
KLMQVEGLTI YHVKSHLQKY RTARYQPESS KGSMEKSTTS LEDISSLDLK TSIDITEALR  360
LQMEVQKKLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKS GNNLKASTLD ESPFSDTVDD  420
FSAKTELETS QVEICTARTD PSEADTISEN VTNEEGGKPE AQHRKVPENT EPDVSKSSSQ  480
LSKRQRTEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-103	G2-like family protein