PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532411.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 244aa    MW: 26872.5 Da    PI: 8.6589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86e-1186134455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++  rE+ RRd++N++f eL  +l +    + +K +K++iL  A++ + +Lq
  XP_023532411.1  86 SKACREKLRRDKLNESFLELAAVLEPG---KPPKTDKVAILSDAIRMVTDLQ 134
                     6789**********************9...99***************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDYSAGNWNW LFDYSTMDDL AVAAAAAAAG NFSPPQSVGF SWSNPSINFS SKDSLEVDCS  60
YGDQDGLQEV GRKRPKTETG AAASSSKACR EKLRRDKLNE SFLELAAVLE PGKPPKTDKV  120
AILSDAIRMV TDLQSETQKL KQSKEDLKAK IKELKVEKNE LRDEKQRLRA EKEKLELQIK  180
GVNTRAADIH RRPPTLSPAF TAQGQAAGNK LMPFIGYPGI AMWQFLPPAA VDISQDHVLR  240
PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-84bHLH family protein