PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023532396.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 355aa MW: 39942.6 Da PI: 9.6911

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023532396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	186	239	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023532396.1 186 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 239 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.2e-15	187	238	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023532396.1 187 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 238 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MELFPAQPDL SLQISPPNTN KPSSTWRTTT PSQEHLDLGF WNNLNLESAK PTPKHHPTNQ 60 HFDLSLSNFT QINQYSNIPP PPPPPLPHHH HPAFHGGAHL FQTLHKTHHP PTIFHHTPPP 120 PPTTSHPFPG QNNVQDLAFL RPIRGIPVYH QTTNPAGTPS ASGHGQIMMR SRFLSRFPAK 180 RSMRAPRMRW TSTLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV 240 KTTDRAAASS GDTSNIEDII FDIQKPSMGR QNEHSVQQNR QNPHQDKDYH ALWSNSSREA 300 WLHGFPNDSS RDLSSSLEND VDPKSSNNER LSEISSSGNL LPEKPNLEFT LGRAV

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MELFPAQPDL SLQISPPNTN KPSSTWRTTT PSQEHLDLGF WNNLNLESAK PTPKHHPTNQ  60
HFDLSLSNFT QINQYSNIPP PPPPPLPHHH HPAFHGGAHL FQTLHKTHHP PTIFHHTPPP  120
PPTTSHPFPG QNNVQDLAFL RPIRGIPVYH QTTNPAGTPS ASGHGQIMMR SRFLSRFPAK  180
RSMRAPRMRW TSTLHARFVH AVELLGGHER ATPKSVLELM DVKDLTLAHV KSHLQMYRTV  240
KTTDRAAASS GDTSNIEDII FDIQKPSMGR QNEHSVQQNR QNPHQDKDYH ALWSNSSREA  300
WLHGFPNDSS RDLSSSLEND VDPKSSNNER LSEISSSGNL LPEKPNLEFT LGRAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-62	G2-like family protein