PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532317.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 155aa MW: 17054.5 Da PI: 8.5137 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.00061 | 35 | 57 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_023532317.1 35 FVCKTCNREFSSFQALGGHRASH 57 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 12.2 | 0.00056 | 77 | 99 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F+ L H+r+H XP_023532317.1 77 HECSICGLEFPVGQALGGHMRRH 99 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MKRVRFESEI DSLLMADCLI SLSKSKTESF RRRVFVCKTC NREFSSFQAL GGHRASHRKP 60 KFPSDTSQNN AIKSKPHECS ICGLEFPVGQ ALGGHMRRHR NSSPVPVSLT PPQPVSDDSD 120 CDSGNGVVGM DLNLTPLEND LVRLQLMAPP VGCLT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 1e-37 | C2H2 family protein |