PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023532294.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 229aa MW: 25378.9 Da PI: 8.2691 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125.2 | 2.1e-39 | 39 | 98 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+ l+cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGg++rknk+ XP_023532294.1 39 PEQVLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGSCRKNKRP 98 78999****************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDHSSGQQEA EAQPLEDMVG MISCPKVQQE NRKAMRPQPE QVLRCPRCDS TNTKFCYYNN 60 YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG SCRKNKRPSP STSSSSSPSP SSKRSYDQAA 120 NSSYAKLLNQ SNGSMGLFDT HNNYHNMYSG FGNGSSGEVE HASTETATAM KQELLPSGDQ 180 NMVSWGFPWQ FNNGDGNYMG DLDSGRESWS FNGNGIASSW HGLLNSPLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45610.1 | 5e-45 | Dof family protein |