PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023532271.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 289aa    MW: 32311.6 Da    PI: 6.081
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023532271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.12e-28143196155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl Wtp+LH+rFv++v++L G + A Pk+i++lm+v+gLt+e+v+SHLQkYRl
  XP_023532271.1 143 RPRLAWTPQLHKRFVDVVSHL-GLKDAAPKAIMRLMNVDGLTRENVASHLQKYRL 196
                     59*******************.9999****************************8 PP
2Myb_DNA-binding47.15.6e-15145195148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r++WT+++++++vd+v  lG +   +k+I+r m+  g+t++++ s++qky+
   XP_023532271.1 145 RLAWTPQLHKRFVDVVSHLGLKdaAPKAIMRLMNvDGLTRENVASHLQKYR 195
                      799***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEQKKREYHG NGGSGCMNGD ERVLLWEEGL PDADRLTPLS QSLIPQELAS AFRILMEPRR  60
SKSDVYSASK TTILNIRDGQ LEGYTSFEFN DGRTRGEDAL MVESDEAVDP DELGSDSRNL  120
RKVDFVGAEN LIEDAALART LKRPRLAWTP QLHKRFVDVV SHLGLKDAAP KAIMRLMNVD  180
GLTRENVASH LQKYRLYLKR TQISSTTDEA LVPMPMTQNS HDSSHSADSH GNMYLPATFP  240
MTYMPSPMMP MMLYGMGAHH GHGLNDTGMP MMNMCAVPTH SCSTQEQHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.16e-50G2-like family protein