PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531996.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 278aa    MW: 30303.8 Da    PI: 6.8143
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.6e-10158205455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_023531996.1 158 SHSLAERARREKISERMKMLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 205
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDPPLVNESS FSAANPSAYS LAAIWPFGGE QGGSTLGLRM ANLGQILGGF PESSTNRDGS  60
MEESTVTEQS GGGRKRKDVS SEDESSRMVS TSSANQLNKS KGKRMKVVES RDENGDIKAE  120
VESNSGDGKK AAEQSPKPSE PPKDYIHVRA RRGQATDSHS LAERARREKI SERMKMLQDL  180
VPGCNKVIGK ALVLDEIINY IQSLQRQVEF LSMKLETVNS RMNISPGIEV FTAKNIVNQP  240
YDAAAGILYG SQTAREYSQG AQPEWLHMQI GGSFERTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
174103RKRKDVSSEDESSRMVSTSSANQLNKSKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.14e-92bHLH family protein