PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531934.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 306aa    MW: 32669.3 Da    PI: 4.7503
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA529.5e-17225260134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg+++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_023531934.1 225 CTHCGVSSksTPMMRRGPAGPRTLCNACGLKWANKG 260
                     *******99***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MPDSNFQDVM YGSGVMNNVA QDLDNVQTQV GDEDDNVTGR EESIDNPQMR FEDSGEMSGS  60
VSAMNRVQDI VPSAYISSSD YNPLIGNGGA DQLTLSFRGE VYAFDSVSPD KVQAVLLLLG  120
GYEVPSGIPA VGSVPVNQQG ADGFPVRSAQ PQRAASLSRF REKRKERCFG KKIRYNVRKE  180
VALRMQRKKG QFISSKASAD EVGSSSVLAL TLDSGQDDGL LETSCTHCGV SSKSTPMMRR  240
GPAGPRTLCN ACGLKWANKG ILRDLSKVST AGIQEPSVKE TEQSDGEANE SDAAINVDAL  300
ASNGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-75GATA family protein