PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531924.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 461aa MW: 50162 Da PI: 5.5048

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.4e-39	117	177	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s XP_023531924.1 117 PDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRRKNKNSA 177 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MMEIKDSAIR IFGKEIPLPA DSEAPLMESD DSDSSSEKEN RDGAVEKHAI VGKAAESSAA 60 KEETLHDSED YACVKTANEV HMNPEVLSAD ENDKLAASKT EKEQNDAPNS KEKLKKPDKI 120 LPCPRCNSME TKFCYYNNYN VNQPRHFCKA CQRYWTEGGT IRNVPVGAGR RKNKNSASHY 180 QHITISEALR AAQIDVPIEV NHLASKGNGR VLNFSVSAPV CESMVNVSHP AERKVLNGTR 240 NEFEGAKGPC EGGETGDDCS SASSVTMSSS MENGARGFPQ EPQMQNINGF PSQIPCLPGV 300 PWPCSWTAPI PPPAFCPPGV PLSFYPATYW SCSAPGSWNI PWFTPQPCPP IPGPNSPTLG 360 KHSRDGDELQ ADNSEMENPP KQKNGSVLVP KTLRIDDPNE AAKSSIWETL GIKNDSIKAV 420 DLSNVFQSKG DQKSNVSEVL SPVLQANPAA LSRSLTFHER S

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MMEIKDSAIR IFGKEIPLPA DSEAPLMESD DSDSSSEKEN RDGAVEKHAI VGKAAESSAA  60
KEETLHDSED YACVKTANEV HMNPEVLSAD ENDKLAASKT EKEQNDAPNS KEKLKKPDKI  120
LPCPRCNSME TKFCYYNNYN VNQPRHFCKA CQRYWTEGGT IRNVPVGAGR RKNKNSASHY  180
QHITISEALR AAQIDVPIEV NHLASKGNGR VLNFSVSAPV CESMVNVSHP AERKVLNGTR  240
NEFEGAKGPC EGGETGDDCS SASSVTMSSS MENGARGFPQ EPQMQNINGF PSQIPCLPGV  300
PWPCSWTAPI PPPAFCPPGV PLSFYPATYW SCSAPGSWNI PWFTPQPCPP IPGPNSPTLG  360
KHSRDGDELQ ADNSEMENPP KQKNGSVLVP KTLRIDDPNE AAKSSIWETL GIKNDSIKAV  420
DLSNVFQSKG DQKSNVSEVL SPVLQANPAA LSRSLTFHER S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-101	Dof family protein