PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531847.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SRS
Protein Properties Length: 315aa    MW: 31719.2 Da    PI: 8.9389
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702196.39.7e-61972624154
          DUF702   4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssae 95 
                     g  +C+dCGnqakkdC+h+RCR CCksrgfdCathvkstWvpaa+rrerq   aaa++ a+  +   +++  k++r   ++++++ s+t++s+ +
  XP_023531847.1  97 GVGTCHDCGNQAKKDCNHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQVLSAAAAAAATGGTssgSTSGGKKPRLI-ASQTTTNSHTSTSN-T 189
                     5568*********************************************99988877776655533344555555543.44444455555544.4 PP

          DUF702  96 skkeletss...........lPeevsseavfrcvrvssvdd...geeelaYqtavsigGhvfkGiLydqGlee 154
                     ++++++t s           lPe+v+++avf+cvrv++v+    g +e+aYq++v+igGhvfkG+Lyd+G+e+
  XP_023531847.1 190 PTRSFDTCSaadmsykrakkLPEQVRAPAVFKCVRVTAVEGggsGGNEYAYQAVVKIGGHVFKGYLYDHGVEA 262
                     55677777678899999999********************8544679***********************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MWPSSSSSRP IAGAYGHTAP PPTDMVGLMA SGYGVGLSVL PLLTGLAPSS VGIEETNLMI  60
SRGGGGDGGG GGGGVQFHGN NFDGFGFLGG GSSLNSGVGT CHDCGNQAKK DCNHRRCRSC  120
CKSRGFDCAT HVKSTWVPAA RRRERQVLSA AAAAAATGGT SSGSTSGGKK PRLIASQTTT  180
NSHTSTSNTP TRSFDTCSAA DMSYKRAKKL PEQVRAPAVF KCVRVTAVEG GGSGGNEYAY  240
QAVVKIGGHV FKGYLYDHGV EAREGFPMLS DLHLGGGGDG GSTSSPIIDP SDVYGSSAGR  300
GGGLAGGSGY GNPIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.14e-53SRS family protein