PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531790.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

SBP

Protein Properties

Length: 347aa MW: 38902 Da PI: 6.5677

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.1	1.9e-41	66	143	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls++keyhrrh+vC+ hsk+pvv+v+g+e+rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ XP_023531790.1 66 TCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVKGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 143 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDWGWRKFSG ERVTFQENKQ NPTSFSDSIG SNNEEEPILK GSSQESSTSH GSSKRTRLLH 60 ASQNQTCLVD GCDSDLSNCK EYHRRHRVCD LHSKTPVVMV KGEEKRFCQQ CSRFHSLGEF 120 DEVKRSCRKR LDGHNRRRRK PQPESLFISS RDFLSNCKGP IVLQFSDQQV HVPDELGRSL 180 WPMRTEENSS LVPSNSSGFF SFGGGDNKQL PFLQPKNGSK QGKHMVSSQF CFNQQLPDAI 240 SQVSEGDSQK TVPPNNSPED SGCALYLLSS HPVQALPEAG LSSLVQSHLS LPVQTQEETE 300 LNFSSLSDFS ESFGSKDKAV SKTNVHHSEL GLEMEEESNG LFPISWE

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDWGWRKFSG ERVTFQENKQ NPTSFSDSIG SNNEEEPILK GSSQESSTSH GSSKRTRLLH  60
ASQNQTCLVD GCDSDLSNCK EYHRRHRVCD LHSKTPVVMV KGEEKRFCQQ CSRFHSLGEF  120
DEVKRSCRKR LDGHNRRRRK PQPESLFISS RDFLSNCKGP IVLQFSDQQV HVPDELGRSL  180
WPMRTEENSS LVPSNSSGFF SFGGGDNKQL PFLQPKNGSK QGKHMVSSQF CFNQQLPDAI  240
SQVSEGDSQK TVPPNNSPED SGCALYLLSS HPVQALPEAG LSSLVQSHLS LPVQTQEETE  300
LNFSSLSDFS ESFGSKDKAV SKTNVHHSEL GLEMEEESNG LFPISWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	141	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-45	SBP family protein