PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HSF | ||||||||
Protein Properties | Length: 236aa MW: 27310.6 Da PI: 8.7906 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116 | 2.3e-36 | 15 | 107 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa++vLp+yFkh+nf+SFvRQLn+YgFkkv e+ weF +++Fkkg+k+ll++ XP_023531680.1 15 FLTKTYDLVDDPRTDHVVSWGQSHSTFVVWSPPEFATHVLPNYFKHNNFSSFVRQLNTYGFKKVVAER---------WEFGNENFKKGEKQLLSQ 100 9****************************************************************999.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+ks+ XP_023531680.1 101 IHRRKSH 107 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MEQMIEGDKP NPAPFLTKTY DLVDDPRTDH VVSWGQSHST FVVWSPPEFA THVLPNYFKH 60 NNFSSFVRQL NTYGFKKVVA ERWEFGNENF KKGEKQLLSQ IHRRKSHNYN NNNNNTNNLQ 120 FFHLHGELFT ATSSSDSDVL AALTQDNRRL RRRNFMLLSE LTQMKNLYSD IIYFIQNHVK 180 PFDQRNGKWV AKLVELEAPP PQVAVAEAAG ESEEVKLFGV PIRGKKRGAS DEEDRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 3e-64 | HSF family protein |