PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531598.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 538aa MW: 57285.7 Da PI: 6.9502

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531598.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	9e-31	297	355	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023531598.1 297 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 355 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEAAAPSPPP PPPPTATLHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM 60 NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNTGLN LLTTNYSSDQ SMVDDGISSN 120 PQDTKTKNER AVLQAELERV NTENQRLKDT LNQVTSNYQS LQMQFTTLIQ TQKAADAGDS 180 TDEKAGDQET IRHGGGGANN GNKLVPRQFM DLGLATNADI DEPSMSSSEG RSDRSPGTTG 240 EVASSKRHSP DQGSNLGSNK ASKFISSSSG KDVDQTEATM RKARVSVRAR SEAPMITDGC 300 QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED KTILITTYEG NHNHPLPPAA 360 MAMASTTSSA ARMLLSGSMS SADGLMNPNF LARTLLPCSS SMATISASAP FPTVTLDLTQ 420 TPNPLFQRPA PGHFPIPFAA GPTQSFPQIF GHALYNQSKF SGLQMSKEIE AATPPPSQNP 480 LADTLSAASA AIASDPNFIA ALASAMTSLI GGSHHQKENG NGNGNNNVDN NTTSNSQQ

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEAAAPSPPP PPPPTATLHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM  60
NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNTGLN LLTTNYSSDQ SMVDDGISSN  120
PQDTKTKNER AVLQAELERV NTENQRLKDT LNQVTSNYQS LQMQFTTLIQ TQKAADAGDS  180
TDEKAGDQET IRHGGGGANN GNKLVPRQFM DLGLATNADI DEPSMSSSEG RSDRSPGTTG  240
EVASSKRHSP DQGSNLGSNK ASKFISSSSG KDVDQTEATM RKARVSVRAR SEAPMITDGC  300
QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED KTILITTYEG NHNHPLPPAA  360
MAMASTTSSA ARMLLSGSMS SADGLMNPNF LARTLLPCSS SMATISASAP FPTVTLDLTQ  420
TPNPLFQRPA PGHFPIPFAA GPTQSFPQIF GHALYNQSKF SGLQMSKEIE AATPPPSQNP  480
LADTLSAASA AIASDPNFIA ALASAMTSLI GGSHHQKENG NGNGNNNVDN NTTSNSQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-115	WRKY family protein