PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531597.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 546aa    MW: 58163.8 Da    PI: 6.9923
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.2e-31305363259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  XP_023531597.1 305 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 363
                     7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MEAAAPSPPP PPPPTATLHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM  60
NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNVGHP LNFLTGLNLL TTNYSSDQSM  120
VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ  180
KAADAGDSTD EKAGDQETIR HGGGGANNGN KLVPRQFMDL GLATNADIDE PSMSSSEGRS  240
DRSPGTTGEV ASSKRHSPDQ GSNLGSNKAS KFISSSSGKD VDQTEATMRK ARVSVRARSE  300
APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH  360
NHPLPPAAMA MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP  420
TVTLDLTQTP NPLFQRPAPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKEIEAA  480
TPPPSQNPLA DTLSAASAAI ASDPNFIAAL ASAMTSLIGG SHHQKENGNG NGNNNVDNNT  540
TSNSQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-108WRKY family protein