PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 546aa MW: 58163.8 Da PI: 6.9923 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.4 | 9.2e-31 | 305 | 363 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023531597.1 305 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 363 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 546 aa Download sequence |
MEAAAPSPPP PPPPTATLHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM 60 NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNVGHP LNFLTGLNLL TTNYSSDQSM 120 VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ 180 KAADAGDSTD EKAGDQETIR HGGGGANNGN KLVPRQFMDL GLATNADIDE PSMSSSEGRS 240 DRSPGTTGEV ASSKRHSPDQ GSNLGSNKAS KFISSSSGKD VDQTEATMRK ARVSVRARSE 300 APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH 360 NHPLPPAAMA MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP 420 TVTLDLTQTP NPLFQRPAPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKEIEAA 480 TPPPSQNPLA DTLSAASAAI ASDPNFIAAL ASAMTSLIGG SHHQKENGNG NGNNNVDNNT 540 TSNSQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-108 | WRKY family protein |