PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531547.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 175aa MW: 19811.1 Da PI: 9.2229

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.6e-33	95	153	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+ XP_023531547.1 95 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHS 153 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MENYQMFFLC SGGEGLSAYH HPDMSSESGS DVFGSFHGGN LQGNGFMKME TAAVVEGDRN 60 SGGDSYQIGG GKKKGEKKVR KPRYAFETKS QVDILDDGYR WRKYGQKAVK NNKFPRSYYR 120 CTHQGCNVKK QVQRLTRDEG VVVTTYEGMH THSIDKPTDN FEQILSRMQI YGTSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-52	WRKY family protein