PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531538.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 488aa MW: 53842.3 Da PI: 5.0648

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.7e-40	133	193	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_023531538.1 133 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 193 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MSELKDPAIK LFGKTIPLPE PSPASPLPSY LPIDDSTATV NHDRDSPSST VSPEDNIDGD 60 DNDDDDDDGE DLEADKEIIG GKSNGTNMED LDGDGDENLS KVVCGEESNP SSTTKNDEQN 120 ETSNSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY WTAGGTMRNV 180 PVGAGRRKNK NSASHNRQII VSEAFQHART DVSNVMSHSS LRPNGNVLAF GSDTPLCESM 240 TSILNIADQT RQNGSRNGFK KPEALKIPVA YENGEHDHHQ SQESCANEEA KSGRQDQVIH 300 DCQGFLPQIP FFPPGAPWPY PWHSPQWSSP VPPPPNFYPP GIPVPFYPAA PFWGCTVPNP 360 WTLPWLPQPP SLSPITPNSP TLGKHSRDEN VSKQSDSRDA AQEKDNKAER CLWIPKTLRI 420 DDPGEAAKSS IWATLGIKND KTDSVSEGLF KAFESKKGDE KNHKTESSPV LQVNPAALSR 480 SIKFHESS

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MSELKDPAIK LFGKTIPLPE PSPASPLPSY LPIDDSTATV NHDRDSPSST VSPEDNIDGD  60
DNDDDDDDGE DLEADKEIIG GKSNGTNMED LDGDGDENLS KVVCGEESNP SSTTKNDEQN  120
ETSNSQEKTL KKPDKILPCP RCNSMDTKFC YYNNYNVNQP RHFCKNCQRY WTAGGTMRNV  180
PVGAGRRKNK NSASHNRQII VSEAFQHART DVSNVMSHSS LRPNGNVLAF GSDTPLCESM  240
TSILNIADQT RQNGSRNGFK KPEALKIPVA YENGEHDHHQ SQESCANEEA KSGRQDQVIH  300
DCQGFLPQIP FFPPGAPWPY PWHSPQWSSP VPPPPNFYPP GIPVPFYPAA PFWGCTVPNP  360
WTLPWLPQPP SLSPITPNSP TLGKHSRDEN VSKQSDSRDA AQEKDNKAER CLWIPKTLRI  420
DDPGEAAKSS IWATLGIKND KTDSVSEGLF KAFESKKGDE KNHKTESSPV LQVNPAALSR  480
SIKFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-84	Dof family protein