PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531476.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 284aa    MW: 30648.8 Da    PI: 9.943
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.7e-31206264259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+y+WrKYGqK++kgs++pr+YYrC+   gCp++kkver+++dp ++++tY g+H+h+
  XP_023531476.1 206 SDEYSWRKYGQKPIKGSPYPRGYYRCSAVkGCPARKKVERARDDPAMLVVTYDGDHRHP 264
                     69*************************988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MAVDLAAFPA TIDDQTAIQD AASASLQSME DLIRLLSKQQ PTQKIADLDC SQVTDFTVSK  60
FKRFISLLNR TGHARFRRGS SSVSDSSVSV LNSLDPLPSS STIDFLKSPD SKAPTESTTT  120
SSLMSTITGD GSVSNEKLGL SLFTPPPPAV SSGKPPLSAK RKCDDSSRFG CKINSKECHC  180
AKRRKSGVKK TVRVPAISSK IAEIPSDEYS WRKYGQKPIK GSPYPRGYYR CSAVKGCPAR  240
KKVERARDDP AMLVVTYDGD HRHPPATVPR AVADASVGFV SQTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-49WRKY family protein