PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023531351.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 284aa    MW: 30846.4 Da    PI: 8.875
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023531351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.42e-3462118459
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                     ++YkeClkNhAas+Ggha+DGCgEfmps++++ ++++++kCaACgCHRnFHRr++e+
  XP_023531351.1  62 LVYKECLKNHAASMGGHALDGCGEFMPSPTATtTDPTSFKCAACGCHRNFHRRDPED 118
                     68***************************999899******************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDLIPAISTA AAAITTGGGG AVKSPEFDAE TPIKFQPTTK SHSFTNGVLK RHHHTPPPPP  60
SLVYKECLKN HAASMGGHAL DGCGEFMPSP TATTTDPTSF KCAACGCHRN FHRRDPEDTI  120
ATPTTTHVIE YQPHHRHHPP PHRSPNSASP PPISSSYYPS APHMLLALSG GMTENAGGGF  180
HHSILTPSSN SRKRFRSKFT QNQKDKMYEF AEKVGWKIQK RDEDLIQDFC SHVGVDRGVL  240
KVWMHNNKNT LCKKDNAQNI NGHGDGDNDT KINRAGANGS SSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-65ZF-HD family protein