PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531285.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 312aa MW: 34986.1 Da PI: 8.0619

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	84.3	2.9e-26	50	148	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsssg........ 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl k i++l+ ++ ++ s + +++ + +++ss+ XP_023531285.1 50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGlSPFHQHMLFPQYHHNSSTlppppppp 144 79*************************************************************54444222244444444444443333333333 PP TCP 89 ...k 89 + XP_023531285.1 145 fafD 148 3331 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MLRSSKEKGF GGKEEGISDE KYDMAKGSTR SRQWSGFRNP RIVRVSRSFG GKDRHSKVCT 60 IRGLRDRRIR LSVPTAIQLY DLQDKLKLGQ PSKVIDWLLD VTKLDIDKLP PLQIPTGLSP 120 FHQHMLFPQY HHNSSTLPPP PPPPFAFDMK DSSTMHIRDV VNQTTMIEKS KSKGKWIDGG 180 NDQEVEEDYN EQIMMNNCNA YNYNTCDHDH DHQHSSGVFP SQIEAQTSSS SCSSLVFTPY 240 ASYITNPFES HIHFLSSNSH TLSNPFIPSS LHPFASQNLK PFPPNFNLKQ LLHADNNNDG 300 GSGKDGAASG SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	4e-47	TCP family protein