PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531262.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 447aa MW: 49897.8 Da PI: 7.7254

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.7e-32	244	299	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_023531262.1 244 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 299 68****************************************************97 PP
2	Myb_DNA-binding	40.4	6.6e-13	246	297	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_023531262.1 246 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 297 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MASTQLSLEC QVQSYSMLLQ YSFGDQHQVP PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE 60 LPLCMQLLTN AVETSRRQLQ ACKAIEAPPS KPVLEQFMPL KNSTTPDDEK PPTILSDKAN 120 WMTSLQLWSQ ANKEYTDPPH SHNNNNNSDT RKQRVSNGDF VPFDKDRNLE PGLGVGGGGV 180 NGVAAEMELL EKGEKKEKKN HCGDTNNNVD GGIVTPTEDR AERGAGEVGL APTTSSTTAQ 240 THRKARRCWS PDLHRRFVNA LQMLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT 300 VRRPSLAPQA SGSPAAQLVV LGLGGLWVPP EYARSPTLYG PPATSHPPSH FYTPASVPQE 360 YYTRTIAPPH LQQHHHQVHL YKGEPTKAAQ ISPASEVRDT AERSESLEEE KSEGGQNGED 420 RRIKGRGSWG RRLEGEESNR SEVSLKF

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MASTQLSLEC QVQSYSMLLQ YSFGDQHQVP PNSHDFYYKL QEFVSRLEQE RLKIDVFKRE  60
LPLCMQLLTN AVETSRRQLQ ACKAIEAPPS KPVLEQFMPL KNSTTPDDEK PPTILSDKAN  120
WMTSLQLWSQ ANKEYTDPPH SHNNNNNSDT RKQRVSNGDF VPFDKDRNLE PGLGVGGGGV  180
NGVAAEMELL EKGEKKEKKN HCGDTNNNVD GGIVTPTEDR AERGAGEVGL APTTSSTTAQ  240
THRKARRCWS PDLHRRFVNA LQMLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQKYRLHT  300
VRRPSLAPQA SGSPAAQLVV LGLGGLWVPP EYARSPTLYG PPATSHPPSH FYTPASVPQE  360
YYTRTIAPPH LQQHHHQVHL YKGEPTKAAQ ISPASEVRDT AERSESLEEE KSEGGQNGED  420
RRIKGRGSWG RRLEGEESNR SEVSLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-84	G2-like family protein