PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023531209.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GeBP

Protein Properties

Length: 403aa MW: 44592.7 Da PI: 4.705

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023531209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.1	4.9e-37	111	209	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgke++f+++hdq +fe+s+ XP_023531209.1 111 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISR 205 579***********************633446********************************************************* PP DUF573 94 kiWg 97 kiW XP_023531209.1 206 KIWS 209 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDPRNDAVFP DEDLEDDEES LDDDDDDEEE EELNDGPSPS TSSAGAVAVP SVSPVVTIAT 60 PGTAVRPVSI VPPPSIVSIS SAVLIRQRIG TAAAEPLVLP GEKKPLDECR KLFQRLWTDE 120 DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV 180 IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVEDNA LDDDEPAPPP YANYMDIKNE 240 EMTLNCSEKK PTPTPKSRKR SRPGSGLRMD GPRSSNENLN KEKNSTYFHN NNNNNNSENV 300 SNVAVAGLIE ETVRSCLSPL FKELSSTSMG GGLCGGRGFS GLALHPIPLS FGGASINFGG 360 GGDMADERWR KQQILELEVY SKRLELVQEQ IKTALEDLRS MGG

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDPRNDAVFP DEDLEDDEES LDDDDDDEEE EELNDGPSPS TSSAGAVAVP SVSPVVTIAT  60
PGTAVRPVSI VPPPSIVSIS SAVLIRQRIG TAAAEPLVLP GEKKPLDECR KLFQRLWTDE  120
DEIELLQGFL DYTMQRGTTH HHQNDTALFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV  180
IGKISSGKEF NFKSPHDQAT FEISRKIWSN TGRIGVEDNA LDDDEPAPPP YANYMDIKNE  240
EMTLNCSEKK PTPTPKSRKR SRPGSGLRMD GPRSSNENLN KEKNSTYFHN NNNNNNSENV  300
SNVAVAGLIE ETVRSCLSPL FKELSSTSMG GGLCGGRGFS GLALHPIPLS FGGASINFGG  360
GGDMADERWR KQQILELEVY SKRLELVQEQ IKTALEDLRS MGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	8e-57	GeBP family protein