PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023530937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 274aa MW: 29636.7 Da PI: 5.8605 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.4 | 3.5e-29 | 66 | 124 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY+ +Hnh+ XP_023530937.1 66 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYSFDHNHQ 124 69*************************998****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 274 aa Download sequence |
MDRRVRTNAF LSDQEDPGAM SDDGLPGSPT DGNGSRKRRG GQKRVVSVPI GDMEGSKSKG 60 EAYPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP TKLVITYSFD 120 HNHQLPATKS HHHQHHNSSP PSAAIAEDSS PGSETTSPSN SDHTNATPAS PAVVFASQPE 180 LELGGDSLMI KPCIGDFGWL ADVAYDRILE GPIYGGGDMF DDADVMVLSA RGDDEDESLF 240 ADLGELPECS VVFGRRRAVQ PDGPNRTCGR VLDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G58710.2 | 2e-63 | WRKY family protein |