PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530937.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 274aa    MW: 29636.7 Da    PI: 5.8605
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.43.5e-2966124259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY+ +Hnh+
  XP_023530937.1  66 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYSFDHNHQ 124
                     69*************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDRRVRTNAF LSDQEDPGAM SDDGLPGSPT DGNGSRKRRG GQKRVVSVPI GDMEGSKSKG  60
EAYPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP TKLVITYSFD  120
HNHQLPATKS HHHQHHNSSP PSAAIAEDSS PGSETTSPSN SDHTNATPAS PAVVFASQPE  180
LELGGDSLMI KPCIGDFGWL ADVAYDRILE GPIYGGGDMF DDADVMVLSA RGDDEDESLF  240
ADLGELPECS VVFGRRRAVQ PDGPNRTCGR VLDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-63WRKY family protein