PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023530899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 499aa MW: 53605.7 Da PI: 6.2414 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.4 | 8.1e-30 | 201 | 259 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+rs +d +++++tYeg+Hnh+ XP_023530899.1 201 NDGCHWRKYGQKIAKGNPCPRAYYRCTGApSCPVRKQVQRSVDDISILITTYEGTHNHP 259 8**************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MEAQPLATTA DAVQSAGEDE EHAPKHKVPL MADLEKPSME PLSLASASST WKEEDHEHEQ 60 RLKMAKGEMR EVKEENQRLK RCLDEMMRDY ESLKRQFHDM STINNEAAEE VEDMVSLTLG 120 RSSTDQNKNT CPETKPDLQN IQSPADSEQG KEEDAGQTWP PGKVLKGLAA PPAGEDEVSQ 180 QNPPKKTRVC VRARCDTPTL NDGCHWRKYG QKIAKGNPCP RAYYRCTGAP SCPVRKQVQR 240 SVDDISILIT TYEGTHNHPL PVSAMAMAST TSAAASMLLS GASTSTSRPG LNPSAIGTAS 300 ANLHGMNMYT NSKQFYLSNS SMLSSSLNHP TITLDLTSNP PSASSSSSSS SFHKIPSTYP 360 PKYPFTSLDF GSWNTNINKN VLGMSSDLAK QFPPHSNIYQ ACLQQFAKPS TPPPLPLPDT 420 IAAATKAITS DPSFQSALAA ALSSIIGGGN GGEAVQAMSS YVQAAQGQGS MGFQAAPSLT 480 YSTSKSPSSP GDSRDDDTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 1e-60 | WRKY family protein |