PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530833.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 442aa MW: 49255.4 Da PI: 4.8784

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.6e-33	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fveav++LGG e+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_023530833.1 231 RPRMRWTPELHESFVEAVDKLGGGENATPKGVLKLMNVEGLTIYHVKSHLQKYRT 285 59****************************************************8 PP
2	Myb_DNA-binding	57.2	4e-18	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av +lGgg t+k + + m+ +g+t +++ks++qky+ XP_023530833.1 233 RMRWTPELHESFVEAVDKLGGGenaTPKGVLKLMNvEGLTIYHVKSHLQKYR 284 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MSSSYQVLPK PFEEKYPKLP VSFQVSPESE AMRHPIPRQV PPLVSNSGTV GHLFSSSSGF 60 RNDFPLMQPL SRERNVQFSS FVSRSDDDGS LLLLHGSSHS EEQSTMVTND LNENSSSWST 120 DALQDLLDFS ENAADQNVEA QSLAGVLMSD DRAKRNDWPD WADQFISVDD TMEPNWSEIF 180 SDANAGDAKV EVLKSSSAHF HAPQNQTNQV DSVPTAEFHS VSNSLSMSST RPRMRWTPEL 240 HESFVEAVDK LGGGENATPK GVLKLMNVEG LTIYHVKSHL QKYRTARYKP ESSEGSSGKK 300 LNRIEEMKSL DLKTSMGITE ALRLQMDVQK RLHEQLEIQR NLQLRIEEQG KYLREMFEQQ 360 RKMETKLKTS SSILENMPLA DDQPENSEQG RVAAGTSTDN ADEDGLSAAS RKQKAHESEA 420 ILSSDDISSP DAKRSKSDAT GL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MSSSYQVLPK PFEEKYPKLP VSFQVSPESE AMRHPIPRQV PPLVSNSGTV GHLFSSSSGF  60
RNDFPLMQPL SRERNVQFSS FVSRSDDDGS LLLLHGSSHS EEQSTMVTND LNENSSSWST  120
DALQDLLDFS ENAADQNVEA QSLAGVLMSD DRAKRNDWPD WADQFISVDD TMEPNWSEIF  180
SDANAGDAKV EVLKSSSAHF HAPQNQTNQV DSVPTAEFHS VSNSLSMSST RPRMRWTPEL  240
HESFVEAVDK LGGGENATPK GVLKLMNVEG LTIYHVKSHL QKYRTARYKP ESSEGSSGKK  300
LNRIEEMKSL DLKTSMGITE ALRLQMDVQK RLHEQLEIQR NLQLRIEEQG KYLREMFEQQ  360
RKMETKLKTS SSILENMPLA DDQPENSEQG RVAAGTSTDN ADEDGLSAAS RKQKAHESEA  420
ILSSDDISSP DAKRSKSDAT GL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G29000.2	1e-94	G2-like family protein