PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530656.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 502aa MW: 54806.9 Da PI: 6.4558

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	76.7	2.7e-24	191	247	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk + +rsYY+Ct++gC++kk +e++++ + v+e++Y+++Hnh+ XP_023530656.1 191 SDGYNWRKYGQKQVKIPKGSRSYYKCTYSGCCAKK-IECCDHSGLVTEVVYKSQHNHD 247 7******************************98.*******************7 PP
2	WRKY	99.7	1.9e-31	365	421	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + e+p+vv+itY+g H+h+ XP_023530656.1 365 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPSVVIITYKGVHDHD 421 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MAEPEGFDSN QLGTSKASAE QQDDEEEEME DSENESEVEL EEHKLSELRT ASSVSEAAVK 60 GSCSQTLAPP SANQSSENGR SDGLPDNSAA ESLEGVELKH QAPPASNVEA IQTDQVQEQS 120 QLQIIVYKGP DSEQSPTSVT QSISSSASPS LSEYKLAPKK VHKECKPEPS QKNSSDRKTV 180 FSVPNVRTPA SDGYNWRKYG QKQVKIPKGS RSYYKCTYSG CCAKKIECCD HSGLVTEVVY 240 KSQHNHDPPR KISNPKESVL VPYVEPVVKK IMAEHSVRII NDSDPPMSSK EPLWETASVV 300 ERKRQFSNDS DGNDESKIKN ENDNEYETKQ KVKKSSGGYS GTPLKPGKKP KFVVHAAGDV 360 GISGDGYRWR KYGQKMVKGN PHPRNYYRCT SAGCPVRKHI ESAVENPSVV IITYKGVHDH 420 DMPVPKKRHG PPSAPLVAAA APASMGNMQP KKTDAVQSQI SSTQWSVDAE GELTGEALDL 480 GGEKAMESAR TLLSIGFEIK PC

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MAEPEGFDSN QLGTSKASAE QQDDEEEEME DSENESEVEL EEHKLSELRT ASSVSEAAVK  60
GSCSQTLAPP SANQSSENGR SDGLPDNSAA ESLEGVELKH QAPPASNVEA IQTDQVQEQS  120
QLQIIVYKGP DSEQSPTSVT QSISSSASPS LSEYKLAPKK VHKECKPEPS QKNSSDRKTV  180
FSVPNVRTPA SDGYNWRKYG QKQVKIPKGS RSYYKCTYSG CCAKKIECCD HSGLVTEVVY  240
KSQHNHDPPR KISNPKESVL VPYVEPVVKK IMAEHSVRII NDSDPPMSSK EPLWETASVV  300
ERKRQFSNDS DGNDESKIKN ENDNEYETKQ KVKKSSGGYS GTPLKPGKKP KFVVHAAGDV  360
GISGDGYRWR KYGQKMVKGN PHPRNYYRCT SAGCPVRKHI ESAVENPSVV IITYKGVHDH  420
DMPVPKKRHG PPSAPLVAAA APASMGNMQP KKTDAVQSQI SSTQWSVDAE GELTGEALDL  480
GGEKAMESAR TLLSIGFEIK PC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-119	WRKY family protein