PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530544.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 294aa    MW: 32763.9 Da    PI: 7.9426
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.99.9e-3380136259
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     ++v+YkeClkNhAas+Gg+a+DGCgEfmps geeg+++al+C+AC+CHRnFHR+e e 
  XP_023530544.1  80 KQVKYKECLKNHAASMGGNATDGCGEFMPS-GEEGSIEALTCSACNCHRNFHRKEIEG 136
                     689**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MELTTQDHPI PIPIPLNSRY GGHDLDHDHV IHHHDPSAAC NHIIAAAVNG GSPLPSSQME  60
VELHHNHNNN NNNNNTNTKK QVKYKECLKN HAASMGGNAT DGCGEFMPSG EEGSIEALTC  120
SACNCHRNFH RKEIEGEPYD WLHHPRLGRK LLVGGKNMIA PPEAAAFAYP SVAGPAFISS  180
RAQPHHMIMS YNMLGGGGGQ SESEEHEEAR AYSGPMMNKK RFRTKFTAEQ KEKMLRFAEK  240
VGWKIQKQEE SVVQQFCEEI GVKRRVLKVW MHNNKHNLGK KDTISPPHSP TPLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.16e-71ZF-HD family protein