PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023530498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WRKY | ||||||||
Protein Properties | Length: 274aa MW: 31222.8 Da PI: 8.1967 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.7 | 4.3e-32 | 139 | 196 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts++C vkk+vers +dp++v++tYeg+H h+ XP_023530498.1 139 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSLVITTYEGQHIHH 196 8*******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MANDEGENKV YQQYDPFVYN QLDMNRTILQ QQPSLDPAFM SFTNFIDTSL EYNSVWRPLD 60 VSCSSSELIS PVDDMSKKKA SNASVSSSSD EAAPAAEDDS VKSKKEEKRK KQNAAQKKEK 120 REREPRFAFL TKSEIDQLED GYRWRKYGQK AVKNSPYPRS YYRCTSQKCV VKKRVERSYQ 180 DPSLVITTYE GQHIHHCPAT LRGHSSPFYA SASTSTLATA PSSGPALPQE LFSHLLSKNC 240 QTDPTSMVYQ NPNLQQHLQM SDHHSLLQDL FTQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 1e-45 | WRKY family protein |