PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530429.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 265aa    MW: 29172.2 Da    PI: 7.0787
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530429.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.85.4e-31168224158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++p+ VNaKQyq+Il+RRq+Rak+e+ekkl +k+rkpylheSRh+hA+rR RgsgGrF
  XP_023530429.1 168 QDPVLVNAKQYQGILRRRQARAKAEAEKKL-IKARKPYLHESRHQHAIRRTRGSGGRF 224
                     589***************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MQSKSETNSQ FESDPNGTPS TSIYYEPWWR GIGYNPIPLP MVGGNASSST SLEFANGGSE  60
SNDGQSVSNN DVNDEEDVSK EVQATGSPHS AGNYRQAAQK MQHVSSTFPV MHGECLMQST  120
QLELACASNP YQDPSYGGMM AFYGHQPLGY PMVGMPHARM PLPIEIAQDP VLVNAKQYQG  180
ILRRRQARAK AEAEKKLIKA RKPYLHESRH QHAIRRTRGS GGRFTKKNEA DGKEMHSDEV  240
NENGRHLNDG SKQQNGSSLT NMASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-49NF-YA family protein