PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530428.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 270aa    MW: 29665.8 Da    PI: 7.1264
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.85.6e-31173229158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++p+ VNaKQyq+Il+RRq+Rak+e+ekkl +k+rkpylheSRh+hA+rR RgsgGrF
  XP_023530428.1 173 QDPVLVNAKQYQGILRRRQARAKAEAEKKL-IKARKPYLHESRHQHAIRRTRGSGGRF 229
                     589***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MQSKSETNSQ FESDPNGTPS TSIYYEPWWR GIGYNPIPLP MVGGNASSST SLEFANGGSE  60
SNDGQSVSNN DVNDEEDVSK EVQATGSPHS AGNYRQAAQK MQHVSSTFPV MHGECLMQST  120
QLELVGHSIA CASNPYQDPS YGGMMAFYGH QPLGYPMVGM PHARMPLPIE IAQDPVLVNA  180
KQYQGILRRR QARAKAEAEK KLIKARKPYL HESRHQHAIR RTRGSGGRFT KKNEADGKEM  240
HSDEVNENGR HLNDGSKQQN GSSLTNMASE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.11e-52NF-YA family protein