PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530140.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 167aa    MW: 17870.4 Da    PI: 9.5365
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA633.5e-202558134
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                    C+ C+ttkTplWR gp g+k+LCnaCG+++rk++
  XP_023530140.1 25 CVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRR 58
                    ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGMMDVTQKG LLPRTQLQDQ TNKCCVDCNT TKTPLWRGGP AGPKSLCNAC GIRFRKRRIS  60
TNRGYVRKKE RPHSSTAMAA VSATTSSSST GTTAINTTTT TTSGGGSGDG EEDLGECRSL  120
RMRVMMPFRE EVVVVQNVSS VQKQGKLGEE EQAAVLLMAL SCGSVFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-21GATA family protein