PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023530102.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 390aa MW: 43150.5 Da PI: 8.2573

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023530102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.8	5.2e-33	248	303	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+e+m+v+gLt+++vkSHLQkYRl+ XP_023530102.1 248 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIREMMQVDGLTNDEVKSHLQKYRLH 303 79****************************************************97 PP
2	Myb_DNA-binding	46.5	8.3e-15	250	301	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I ++m+ g+t ++ks++qky+ XP_023530102.1 250 RRCWSPELHRRFVNALQQLGGSqvaTPKQIREMMQvDGLTNDEVKSHLQKYR 301 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MPSVSPKFTW DFRPKTVSDF LHQISLIANA SDRVSRLGDF INSLEEEMKK IDAFKRELPF 60 CMLLLNDAIL ALKGSSLQCV SSSCSSPKTK PVLEEFISLN KDSPNDNEKK QDCRDKKEWM 120 SSVQLWNSDD FQNTQTKAKR NEGCGYLATA ADDRFPPCRN KNEERLFVGF KSSSSAFPAM 180 AAVNKQEKME SPMCALSLVT PSLKNPKQEL GSCVLGSSGN RATLASAPDA LSNLRTVLPP 240 QHQQPARKQR RCWSPELHRR FVNALQQLGG SQVATPKQIR EMMQVDGLTN DEVKSHLQKY 300 RLHTRRLPST PATGAADRSP VVLGDLWTSQ DGCGESSKVS SSQSASPQGP FQLAGNGGYS 360 TTGGDSMEDE EDTKSESYEY LKTEAHTSKR

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MPSVSPKFTW DFRPKTVSDF LHQISLIANA SDRVSRLGDF INSLEEEMKK IDAFKRELPF  60
CMLLLNDAIL ALKGSSLQCV SSSCSSPKTK PVLEEFISLN KDSPNDNEKK QDCRDKKEWM  120
SSVQLWNSDD FQNTQTKAKR NEGCGYLATA ADDRFPPCRN KNEERLFVGF KSSSSAFPAM  180
AAVNKQEKME SPMCALSLVT PSLKNPKQEL GSCVLGSSGN RATLASAPDA LSNLRTVLPP  240
QHQQPARKQR RCWSPELHRR FVNALQQLGG SQVATPKQIR EMMQVDGLTN DEVKSHLQKY  300
RLHTRRLPST PATGAADRSP VVLGDLWTSQ DGCGESSKVS SSQSASPQGP FQLAGNGGYS  360
TTGGDSMEDE EDTKSESYEY LKTEAHTSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-51	G2-like family protein