PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529996.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 582aa    MW: 64964 Da    PI: 7.0938
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.84.9e-1042105811374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPil 91 
                     l +lL++cAeav+ +d + a+ lL++l+ +a   g+++qR+a++f+++La rla  ++  y  +     ++++++++ +++  al+l +e+ P +
  XP_023529996.1 210 LLHLLVACAEAVACRDRSHASILLSELRANALVLGSSFQRVASCFVQGLADRLALVQPLGYVGFglpmMSRADHSSERKKKDEALNLVYEIYPHI 304
                     579***************************************************9777666655311133333334455556677779******* PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                     +f+h++aN+ Ile +ege+ vH++D+++     +G QW +L+++La+ p+    lR+Tg+g     s ++++ +ge+L++ Aee+gv++e  + v
  XP_023529996.1 305 QFGHFVANSSILEVFEGENSVHVLDLGMAfglpYGHQWRSLIESLAECPNR-QLLRVTGIGL----SVNRYRLMGEKLKSHAEEFGVQVEVLA-V 393
                     *************************87762222678***********9876.89********....9************************99.7 PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     + +le+l++++++++ gEal++ +++q+h +++es        +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+
  XP_023529996.1 394 EGNLENLRPQDIKLHDGEALVITSIFQMHGVVKESRGALT---SVLRMIYDLSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 485
                     99*****************************977665555...8*************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
                      +  r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++  +++qak  + k+k s+ y+v ee+g+lvlgWk++p+v++S
  XP_023529996.1 486 YDTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPIK--VMAQAKQWIGKFKaSESYTVVEEKGCLVLGWKSKPIVAAS 578
                     ***************************************************95..899**********9999*********************** PP

            GRAS 372 aWr 374
                     +W+
  XP_023529996.1 579 CWK 581
                     **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    
MLPICYLNSL HLYHTIRPSG RNKNKRKKGN LVNSAQQCSI TIALTLCFTI SFHFHHETTH  60
TPSMASDADG GTFLSTDFRN EAEEVVDQTA TAHELCLPHR RHCLSLMDDT AASRWVISFS  120
DEFRHHKKFK LEPDSIAIHD GGGSSTHGST SLSLSRSSSS DSLSTGFRAH IWTYNQRYVA  180
AEAVEEAAAA IINAEESAAE EDASADGMRL LHLLVACAEA VACRDRSHAS ILLSELRANA  240
LVLGSSFQRV ASCFVQGLAD RLALVQPLGY VGFGLPMMSR ADHSSERKKK DEALNLVYEI  300
YPHIQFGHFV ANSSILEVFE GENSVHVLDL GMAFGLPYGH QWRSLIESLA ECPNRQLLRV  360
TGIGLSVNRY RLMGEKLKSH AEEFGVQVEV LAVEGNLENL RPQDIKLHDG EALVITSIFQ  420
MHGVVKESRG ALTSVLRMIY DLSPKALVLV EQDSNHNGPF FLGRFMEALH YYSAIFDSLD  480
AMLPKYDTRR AKIEQFYFAE EIKNIVSCEG MARVERHERV DQWRRRMSRA GFQAAPIKVM  540
AQAKQWIGKF KASESYTVVE EKGCLVLGWK SKPIVAASCW KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-72GRAS family protein