PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529996.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 582aa MW: 64964 Da PI: 7.0938 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 339.8 | 4.9e-104 | 210 | 581 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklfsevsPil 91 l +lL++cAeav+ +d + a+ lL++l+ +a g+++qR+a++f+++La rla ++ y + ++++++++ +++ al+l +e+ P + XP_023529996.1 210 LLHLLVACAEAVACRDRSHASILLSELRANALVLGSSFQRVASCFVQGLADRLALVQPLGYVGFglpmMSRADHSSERKKKDEALNLVYEIYPHI 304 579***************************************************9777666655311133333334455556677779******* PP GRAS 92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182 +f+h++aN+ Ile +ege+ vH++D+++ +G QW +L+++La+ p+ lR+Tg+g s ++++ +ge+L++ Aee+gv++e + v XP_023529996.1 305 QFGHFVANSSILEVFEGENSVHVLDLGMAfglpYGHQWRSLIESLAECPNR-QLLRVTGIGL----SVNRYRLMGEKLKSHAEEFGVQVEVLA-V 393 *************************87762222678***********9876.89********....9************************99.7 PP GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277 + +le+l++++++++ gEal++ +++q+h +++es +vL+++ +lsPk +v+veq+++hn++ Fl rf+eal+yysa+fdsl+a lp+ XP_023529996.1 394 EGNLENLRPQDIKLHDGEALVITSIFQMHGVVKESRGALT---SVLRMIYDLSPKALVLVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPK 485 99*****************************977665555...8*************************************************** PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371 + r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++ +++qak + k+k s+ y+v ee+g+lvlgWk++p+v++S XP_023529996.1 486 YDTRRAKIEQFYFAEEIKNIVSCEGMARVERHERVDQWRRRMSRAGFQAAPIK--VMAQAKQWIGKFKaSESYTVVEEKGCLVLGWKSKPIVAAS 578 ***************************************************95..899**********9999*********************** PP GRAS 372 aWr 374 +W+ XP_023529996.1 579 CWK 581 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 582 aa Download sequence |
MLPICYLNSL HLYHTIRPSG RNKNKRKKGN LVNSAQQCSI TIALTLCFTI SFHFHHETTH 60 TPSMASDADG GTFLSTDFRN EAEEVVDQTA TAHELCLPHR RHCLSLMDDT AASRWVISFS 120 DEFRHHKKFK LEPDSIAIHD GGGSSTHGST SLSLSRSSSS DSLSTGFRAH IWTYNQRYVA 180 AEAVEEAAAA IINAEESAAE EDASADGMRL LHLLVACAEA VACRDRSHAS ILLSELRANA 240 LVLGSSFQRV ASCFVQGLAD RLALVQPLGY VGFGLPMMSR ADHSSERKKK DEALNLVYEI 300 YPHIQFGHFV ANSSILEVFE GENSVHVLDL GMAFGLPYGH QWRSLIESLA ECPNRQLLRV 360 TGIGLSVNRY RLMGEKLKSH AEEFGVQVEV LAVEGNLENL RPQDIKLHDG EALVITSIFQ 420 MHGVVKESRG ALTSVLRMIY DLSPKALVLV EQDSNHNGPF FLGRFMEALH YYSAIFDSLD 480 AMLPKYDTRR AKIEQFYFAE EIKNIVSCEG MARVERHERV DQWRRRMSRA GFQAAPIKVM 540 AQAKQWIGKF KASESYTVVE EKGCLVLGWK SKPIVAASCW KC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 8e-72 | GRAS family protein |