PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 697aa MW: 76118.4 Da PI: 5.5164 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.1e-29 | 211 | 264 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_023529979.1 211 KPRVVWSVELHKKFVSAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 264 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.6 | 2.9e-13 | 213 | 263 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_023529979.1 213 RVVWSVELHKKFVSAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 263 678***********************************************7 PP | |||||||
3 | Response_reg | 84.5 | 3.1e-28 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l++ +y +v++++++ eal++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ e++ + ++ G XP_023529979.1 26 VLAVDDDPICLKVLETLLRRCQY-HVTTTKQSIEALKMLRENRnnFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTELVMKGISHG 118 799********************.***************999889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_023529979.1 119 ACDYLLKPVRIEELKN 134 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 697 aa Download sequence |
MTVETHSVTS VGDDGATDRF PVGMRVLAVD DDPICLKVLE TLLRRCQYHV TTTKQSIEAL 60 KMLRENRNNF DLVISDVNMP DMDGFKLLEL VGLEMDLPVI MLSAHSDTEL VMKGISHGAC 120 DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPSEDKAL NGGSEGEQGF SSTSNADNAK 180 FNRKRKDQDD DDDEDGKDNG LDNDDPSNQK KPRVVWSVEL HKKFVSAVNQ LGLEKAVPKK 240 ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQVSMV ATFGSKDGAF MGMGSLDGYG 300 DLHGFAGMGR LQNSSLSSYS PVGMLGRLNS PAGMSLRGIT SSGLIQQNSK NLNSAISNLG 360 KLQPTTMLPP NQPTNLLQGI PTSLELSQLQ HSKSTIPIGD FNIINETSGF GVPNSFPDSR 420 VNIGNSTNLV STAPLMLQGT MPTYGNQTSL RVDPLNGETF DVDIGGSNFL DPDPSNGTWQ 480 GAAQLSRFSA NSLNQNQAYP NDQFNAINSS ISLTPSTFGN VSVDFSSRSA VAAPLQDSRD 540 MQCQAGVVGS VIPTINTMPK QSWEELKHDY SRNVQHNLGA INSLISGNET LNPLSQSFNQ 600 NNLVYDRKVS SSLMVPSNAA PLSFAQHNMV EKLGPNTKTN VDGNYLLNQT KSHDGSTQGS 660 SESLDYIMNA MIKREQNEIP EVNGEFGFDN FSLGSCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-131 | ARR-B family protein |