PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRF | ||||||||
Protein Properties | Length: 324aa MW: 36983.2 Da PI: 8.98 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.8 | 1.1e-24 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_023529975.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP | |||||||
2 | QLQ | 58.6 | 1.8e-20 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_023529975.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MCTRSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSPF TSKLFPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN RLSNPAFSSL TNNSSLLSYR PFPAHQISST SNGNGLSPQD TNTLLLLESG 180 SYSDRNPDYR SRDTYGLKEK VDEYAFFSQE PSESAARADS LQLTPLTMSC SSLYPKQNNC 240 SSLQNDQSCY QLHQSLTDPL KQQKRDESQK TVHRFFDEWP PKERGSRLDF EDKSSNTGSV 300 STIRPSTSIP TTSNDFPIFG FNNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 2e-55 | GRF family protein |