PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529974.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GRF

Protein Properties

Length: 325aa MW: 37139.4 Da PI: 9.1474

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1.1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_023529974.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP
2	QLQ	58.6	1.8e-20	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky++++ P+Pp+Ll+ i++ XP_023529974.1 8 PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR 43 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MCTRSMFPFT SAQWQELEHQ ALIFKYMVSG IPIPPDLLFS IKRSTLDSPF TSKLFPHHPQ 60 HVGWNYLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNDIN RLSNPAFSSL TNNSSLLSYR PFPAHQISST SNGNGLSPQD TNTLLLLESG 180 SYSDRNPDYR RSRDTYGLKE KVDEYAFFSQ EPSESAARAD SLQLTPLTMS CSSLYPKQNN 240 CSSLQNDQSC YQLHQSLTDP LKQQKRDESQ KTVHRFFDEW PPKERGSRLD FEDKSSNTGS 300 VSTIRPSTSI PTTSNDFPIF GFNNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-55	GRF family protein