PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 278aa MW: 31731.9 Da PI: 6.3149 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.1 | 2.9e-52 | 15 | 162 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....................kvkaeekewyfFskrdkkyatgkr 73 lppGfrFhPtdeel+++yL +kv ++ + +i+evd++k+ePwdLp + k+k +ekewyfF+ rd+ky++g r XP_023529968.1 15 LPPGFRFHPTDEELITHYLSQKVVSSGFCS-PAIAEVDLNKCEPWDLPgNsaatewflrlclceqlnlctgKAKMGEKEWYFFCVRDRKYPSGLR 108 79*************************877.78***************5489**************999987778999***************** PP NAM 74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +nratk+gyWkatgkd+e+++ ++ lvg kktLvfykgrap+g+k++Wvmheyrl XP_023529968.1 109 TNRATKAGYWKATGKDREIFK-GRCLVGFKKTLVFYKGRAPRGQKSNWVMHEYRL 162 *********************.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MEKSEEEEDQ TVMELPPGFR FHPTDEELIT HYLSQKVVSS GFCSPAIAEV DLNKCEPWDL 60 PGNSAATEWF LRLCLCEQLN LCTGKAKMGE KEWYFFCVRD RKYPSGLRTN RATKAGYWKA 120 TGKDREIFKG RCLVGFKKTL VFYKGRAPRG QKSNWVMHEY RLHAQSSAFS QKEWVICRVL 180 KKRSGKKGEE TGMSSTVLPP LMESEASLVT CFSNSMEDGT ELLDKFWSGH FEEEEEDGGG 240 EVWRLKVGSS KGFEEPFGFG ANHHPSPPLD DVHCLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.1 | 4e-84 | NAC family protein |