PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529696.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family CO-like
Protein Properties Length: 413aa    MW: 45201.4 Da    PI: 5.1825
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.21.1e-05535636
        zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg 36
                    C+ +++++ + +C++++  lC +C  + H+ 
  XP_023529696.1  5 CDFCGHQRSIVYCRSDSAALCLSCDRNVHSA 35
                    ***************************9954 PP

2CCT60.84.6e-21356399144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     R  a++RYkeK+k RkFeKk+rY+sRK++A+ R RvKGrFvk+ 
  XP_023529696.1 356 RSDAVMRYKEKKKARKFEKKVRYASRKERADIRRRVKGRFVKAG 399
                     889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MGYLCDFCGH QRSIVYCRSD SAALCLSCDR NVHSANALSR RHLRTLLCDR CHSQAAFVRC  60
PEENISLCQN CDYMGHSSSA SISSRKRQPI NCFSGCPTAA ELSSIWSFVL DLPSVGDACE  120
QELGLMSIAE NSAVNAWGPD DQAGQNVSGA DQTNEFSNED RSIWYGSSSM PQYPSKPHVM  180
DQPMTIDATS PKLHCAGTKG PGLDIEDDLY ENLNMDEDSL NLENYDELFG VSLSFSEELL  240
ENGGIDSLFR MKSLSAAKSG CTGVPAAEGA SVGLVNNTMR PASSNAASAD SMMSAKTEPI  300
LCYNNKQEHS SLSFSGMTGE SSAGEPQDCG ASPMLLMGEP PWCSMATESS FQSSNRSDAV  360
MRYKEKKKAR KFEKKVRYAS RKERADIRRR VKGRFVKAGE AYDYDPLNQT RSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.21e-120CO-like family protein