PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023529696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | CO-like | ||||||||
Protein Properties | Length: 413aa MW: 45201.4 Da PI: 5.1825 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.2 | 1.1e-05 | 5 | 35 | 6 | 36 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg 36 C+ +++++ + +C++++ lC +C + H+ XP_023529696.1 5 CDFCGHQRSIVYCRSDSAALCLSCDRNVHSA 35 ***************************9954 PP | |||||||
2 | CCT | 60.8 | 4.6e-21 | 356 | 399 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RYkeK+k RkFeKk+rY+sRK++A+ R RvKGrFvk+ XP_023529696.1 356 RSDAVMRYKEKKKARKFEKKVRYASRKERADIRRRVKGRFVKAG 399 889**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence |
MGYLCDFCGH QRSIVYCRSD SAALCLSCDR NVHSANALSR RHLRTLLCDR CHSQAAFVRC 60 PEENISLCQN CDYMGHSSSA SISSRKRQPI NCFSGCPTAA ELSSIWSFVL DLPSVGDACE 120 QELGLMSIAE NSAVNAWGPD DQAGQNVSGA DQTNEFSNED RSIWYGSSSM PQYPSKPHVM 180 DQPMTIDATS PKLHCAGTKG PGLDIEDDLY ENLNMDEDSL NLENYDELFG VSLSFSEELL 240 ENGGIDSLFR MKSLSAAKSG CTGVPAAEGA SVGLVNNTMR PASSNAASAD SMMSAKTEPI 300 LCYNNKQEHS SLSFSGMTGE SSAGEPQDCG ASPMLLMGEP PWCSMATESS FQSSNRSDAV 360 MRYKEKKKAR KFEKKVRYAS RKERADIRRR VKGRFVKAGE AYDYDPLNQT RSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07650.2 | 1e-120 | CO-like family protein |