PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529499.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 808aa MW: 94144.5 Da PI: 7.7595

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.1e-27	47	132	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ + ++t+Cka+++vk++ dg+w ++++ ++HnHe+ XP_023529499.1 47 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENG---NSRRPSMKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFL 132 *************************************9999877...77778899****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MVDVVAEMHD RDDGIVSLPK DILFERDIDF EPRSGIEFES HEAAYTFYQE YAKSMGFTTS 60 IKNSRRSKKS KEFIDAKFAC SRYGVTPESE NGNSRRPSMK KTDCKASMHV KRRPDGRWII 120 HEFIKDHNHE FLPALAYHFR IHRNVKLAEK NNIDILHAVS ERTRRMYVEM SKKRGVYRNV 180 GFPQIDTTYQ FNKGQYLALD DGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD 240 AKSRNDYVSF SDVVSFDISY IKTNDKLPFA PFIGVNHHGQ SMVLGCALAA DCTKPTFTWL 300 LKTWLRAMDG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHE 360 NFLSKFKKCI LKSWTDEQFD MRWWKLVTRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG 420 MSTAQRSDST NAFFDKYVQK KITLKEFLKQ YGNILQNRYE EETIADFDTL HKQPALKSPS 480 PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL 540 NSEVSCFCRL FEYNGFLCRH ALIVLHMHRF SSIPPQYLLK RWTKDAKSRQ ANTTEGTDFR 600 QNRVQRYNDL CIKAIELSEE GSQSEECYNI VIRALVEALK NCVNINNSKS APAESSVNVY 660 GLREEEENQE SIAAKANKRS TNRKRKVQTE TDMILDESQN NLQQMDGLIS DSMTLSGYYG 720 SQQNVQGLVQ LNLMEPPRDA SYYVNQQSIQ GLGQLNTITA SQDGFFGAQH NGIHALVDYR 780 PATSYSYSLQ DEQHLRSAQL HGSTSRHT

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MVDVVAEMHD RDDGIVSLPK DILFERDIDF EPRSGIEFES HEAAYTFYQE YAKSMGFTTS  60
IKNSRRSKKS KEFIDAKFAC SRYGVTPESE NGNSRRPSMK KTDCKASMHV KRRPDGRWII  120
HEFIKDHNHE FLPALAYHFR IHRNVKLAEK NNIDILHAVS ERTRRMYVEM SKKRGVYRNV  180
GFPQIDTTYQ FNKGQYLALD DGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD  240
AKSRNDYVSF SDVVSFDISY IKTNDKLPFA PFIGVNHHGQ SMVLGCALAA DCTKPTFTWL  300
LKTWLRAMDG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHE  360
NFLSKFKKCI LKSWTDEQFD MRWWKLVTRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG  420
MSTAQRSDST NAFFDKYVQK KITLKEFLKQ YGNILQNRYE EETIADFDTL HKQPALKSPS  480
PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL  540
NSEVSCFCRL FEYNGFLCRH ALIVLHMHRF SSIPPQYLLK RWTKDAKSRQ ANTTEGTDFR  600
QNRVQRYNDL CIKAIELSEE GSQSEECYNI VIRALVEALK NCVNINNSKS APAESSVNVY  660
GLREEEENQE SIAAKANKRS TNRKRKVQTE TDMILDESQN NLQQMDGLIS DSMTLSGYYG  720
SQQNVQGLVQ LNLMEPPRDA SYYVNQQSIQ GLGQLNTITA SQDGFFGAQH NGIHALVDYR  780
PATSYSYSLQ DEQHLRSAQL HGSTSRHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein