PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529225.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 271aa MW: 29550.9 Da PI: 8.9494

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.6	1.9e-33	21	109	2	80
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssasec.eaessss 80 +++kdrhsk+ T++g+RdRRvRlsa++a+rf+d+qd+LG+d++sk+++WL+++ak ai++l ++ +++++++ e+e++ss XP_023529225.1 21 TARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGYDRPSKAVDWLIKKAKFAIDKLRELppyspiangFADPNRKTgETETESS 109 789*************************************************************8776666652222223332222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MKSSAAAEIV PVQGGHIIRS TARKDRHSKV FTAKGPRDRR VRLSAHTAIR FYDVQDQLGY 60 DRPSKAVDWL IKKAKFAIDK LRELPPYSPI ANGFADPNRK TGETETESSE LQSAVGHFAP 120 SLEPFFPTTS ATTSINFQGY PVDLILTPTG PPRDLALSLH NFHDSRLIPS EQNANSSPGN 180 YQRLIGDSIP AGYEGGDAGL WLQQPLMGQN STAAFSQVPM HGWSNQIRQS AGHGGRFEGP 240 SEFCTPSRIR GEGVEDGVVS GSHSSSPNYH R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	6e-46	TCP family protein