PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529038.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 167aa    MW: 18247.1 Da    PI: 8.7457
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.0001456941154
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     R d++ ++   L++l+ +      +K + a++L +A+eYI+ L
  XP_023529038.1 56 ERKDKLGERVLALQQLVSPY-----GKTDTASVLLEAMEYIQFL 94
                    56677777777888888887.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MIASSLCNAS AKFPAEVMEV ETMMEHKRSL CSVDESSLTS LTSKRHKTGF SISSKERKDK  60
LGERVLALQQ LVSPYGKTDT ASVLLEAMEY IQFLHKQVKV LSAPYLQSTP TAQLQEKEPC  120
SHSLRSRGLC LVPISCIAGV ASSNGADIWA PVKTISPKFK NAISPFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.31e-63bHLH family protein