PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023529034.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 281aa    MW: 31892.5 Da    PI: 8.0673
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023529034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.34.6e-37821892133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 
                     +gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++ +aikel +++  +                         ++
  XP_023529034.1  82 TGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNV------------------------EE 152
                     79**************************************************************33333........................12 PP

             TCP  97 skksqksaasalnlakesrakarararertrekmrik 133
                     +++++++ + ++ lakesrakararar+ + ++ +++
  XP_023529034.1 153 KEEDSEKVEVFNLLAKESRAKARARARDDDDDNDNNR 189
                     3344455555788899***********9887777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MASSSFNLNP FPCFPLAFPS LLNSDPSPNN PTFNFHQPHL DPLSFLPPYF PIAHFSASAT  60
GNSSQALGDI PSALTVGTGT RTGKKDRHSK IYTAQGLRDR RVRLSIDIAR KFFDLQDMLG  120
YDKASKTLEW LFGKSRKAIK ELSRSKYGNV EEKEEDSEKV EVFNLLAKES RAKARARARD  180
DDDDNDNNRK YYGHRMSGVE EVSEHWSTET SNLSMEEYSF TNKRRICATK FTGDDDNDDM  240
KPCRDDDAEA SKGYLQERSM IKRKWKASSI DGIPSYPFSK I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.24e-29TCP family protein