PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529029.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 377aa MW: 41168.9 Da PI: 7.7085

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.3e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m++ gLtl+h+kSHLQkYRl XP_023529029.1 40 KPRLKWTPDLHDRFVEAVNQLGGPDKATPKTVMKIMGISGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	64.8	1.6e-20	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg+ t+kt+++ mg g+tl+++ks++qky+ XP_023529029.1 42 RLKWTPDLHDRFVEAVNQLGGPdkaTPKTVMKIMGiSGLTLYHLKSHLQKYR 93 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL 60 GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGTVAVSVD 120 QRLGEANGAG RTNNSIAVAP QASSQPNKSL QISETIQMQI EVQKRLHEQL EVQRHLQLRI 180 EAQGKYLQTV LEKAQETLGT QNLGTVGLEA AKVQLSELVS KVSTQCLTAA FPELHHQQQQ 240 QQNQPQRLCP QQTQPPDCSM DSCLTSCEAS KDQQNGHLAL QPYAIATDRG SSAADQLHGL 300 SMGMGLVQGE KGEGYNGYSP SEGQRFGSTR KEGVEREKVV EGAFRYRMDL NAGEDQLSDN 360 DHAASNTCKM FDLNGFS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL  60
GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGTVAVSVD  120
QRLGEANGAG RTNNSIAVAP QASSQPNKSL QISETIQMQI EVQKRLHEQL EVQRHLQLRI  180
EAQGKYLQTV LEKAQETLGT QNLGTVGLEA AKVQLSELVS KVSTQCLTAA FPELHHQQQQ  240
QQNQPQRLCP QQTQPPDCSM DSCLTSCEAS KDQQNGHLAL QPYAIATDRG SSAADQLHGL  300
SMGMGLVQGE KGEGYNGYSP SEGQRFGSTR KEGVEREKVV EGAFRYRMDL NAGEDQLSDN  360
DHAASNTCKM FDLNGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-102	G2-like family protein