PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023529027.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 383aa MW: 41855.8 Da PI: 7.9496

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023529027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.4e-34	40	94	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LH+rFveav+qLGG++kAtPkt++++m++ gLtl+h+kSHLQkYRl XP_023529027.1 40 KPRLKWTPDLHDRFVEAVNQLGGPDKATPKTVMKIMGISGLTLYHLKSHLQKYRL 94 79****************************************************8 PP
2	Myb_DNA-binding	64.8	1.7e-20	42	93	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+++++++v+av+qlGg+ t+kt+++ mg g+tl+++ks++qky+ XP_023529027.1 42 RLKWTPDLHDRFVEAVNQLGGPdkaTPKTVMKIMGiSGLTLYHLKSHLQKYR 93 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL 60 GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT 120 VAVSVDQRLG EANGAGRTNN SIAVAPQASS QPNKSLQISE TIQMQIEVQK RLHEQLEVQR 180 HLQLRIEAQG KYLQTVLEKA QETLGTQNLG TVGLEAAKVQ LSELVSKVST QCLTAAFPEL 240 HHQQQQQQNQ PQRLCPQQTQ PPDCSMDSCL TSCEASKDQQ NGHLALQPYA IATDRGSSAA 300 DQLHGLSMGM GLVQGEKGEG YNGYSPSEGQ RFGSTRKEGV EREKVVEGAF RYRMDLNAGE 360 DQLSDNDHAA SNTCKMFDLN GFS

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MYHHHQHRGK SIHSSERHLF LQGGNGPGGD SGLVLSTDAK PRLKWTPDLH DRFVEAVNQL  60
GGPDKATPKT VMKIMGISGL TLYHLKSHLQ KYRLSKNMHG QANGGSGTNN KTGMGWRVGT  120
VAVSVDQRLG EANGAGRTNN SIAVAPQASS QPNKSLQISE TIQMQIEVQK RLHEQLEVQR  180
HLQLRIEAQG KYLQTVLEKA QETLGTQNLG TVGLEAAKVQ LSELVSKVST QCLTAAFPEL  240
HHQQQQQQNQ PQRLCPQQTQ PPDCSMDSCL TSCEASKDQQ NGHLALQPYA IATDRGSSAA  300
DQLHGLSMGM GLVQGEKGEG YNGYSPSEGQ RFGSTRKEGV EREKVVEGAF RYRMDLNAGE  360
DQLSDNDHAA SNTCKMFDLN GFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-103	G2-like family protein